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Two coupling reagents for peptide synthesis, diphenyl phosphorazidate (DPPA) and diethyl phosphorocyanidate (DEPC), were tested using the solid-phase method.The reactivities of DPPA and DEPC were examined by coupling Boc-Ile with Gly-resin.In a comparison of these reagents with DCCD, these reagents showed higher reactivity than DCCD in DMF.The N-Boc derivative of malanocyte release inhibiting hormone was synthesized in good yield by the solid-phase method using these reagents.Racemization during fragment condensation on the polymer support was examined by coupling Boc-Gly-L-Ala with Leu-resin (Izumiya test).Keywords – amino acid; peptide; melanocyte release inhibiting hormone; racemization; fragment condensation; Izumiya test

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The natural product belactosin A (1) with a trans-cyclopropane structure is a useful prototype compound for developing potent proteasome (core particle, CP) inhibitors. To date, 1 and its analogues are the only CP ligands that bind to both the nonprimed S1 pocket as well as the primed substrate binding channel; however, these molecules harbor a high IC50 value of more than 1 muM. We have performed structure-activity relationship studies, thereby elucidating unnatural cis-cyclopropane derivatives of 1 that exhibit high potency to primarily block the chymotrypsin-like active site of the human constitutive (cCP) and immunoproteasome (iCP). The most active compound 3e reversibly inhibits cCP and iCP similarly with an IC50 of 5.7 nM. X-ray crystallographic analysis of the yeast proteasome in complex with 3e revealed that the ligand is accommodated predominantly into the primed substrate binding channel and covalently binds to the active site threonine residue via its beta-lactone ring-opening.

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In homogeneous catalysis, the catalyst is in the same phase as the reactant. The number of collisions between reactants and catalyst is at a maximum.In a patent, 20375-65-9, name is 3-Phenyl-6-chloropyridazine, introducing its new discovery. category: pyridazine

A novel macrobicyclic receptor, 3, has been synthesised by linking together a diaminopyridine with suitable amino acids, followed by a double intramolecular cyclisation of a suitably activated precursor. Macrobicycle 3 features a diamidopyridirie unit, designed to serve as a specific binding site for carboxylic acid functionality, at the base of an open, bowl-shaped cavity. Incorporation of additional amide functionality around the rim of the bowl-shaped structure provides further hydrogen bonding sites to interact with pcptidic guests. The binding properties of 3 with N-protected amino acid and peptide derivatives have been investigated by NMR titration experiments, which reveal that 3 is a strong and selective receptor for peptides with a carboxylic acid terminus in CDCl3 solution, the strongest binding being observed with Cbz-beta-alanyl-D-alanine (-DeltaGass = 22.8 kJ mol-1). The macrobicycle is reasonably enantioselective (Cbz-beta-alanyl-L-alanine, -DeltaGass = 19.1 kJ mol-1) and notably the binding of Cbz-beta-alanyl lactic acids is considerably weaker than the binding of the corresponding Cbz-beta-alanyl alanines (DeltaDeltaGass ? 8-9 kJ mol-1). Molecular modelling and 2D NMR studies have been carried out on the free macrobicycle and the 1:1 complex formed with the most strongly bound substrate (Cbz-beta-alanyl-D-alanine). These studies provide a consistent picture of the macrobicycle as a flexible receptor, which is able to bind the Cbz-beta-alanyl-D-alanine substrate in the macrobicyclic cavity with a series of well defined hydrogen bonds to the alanylalanine amide, and less well defined hydrogen bonds to the benzylcarbamate functionality. The Royal Society of Chemistry 2000.

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A compound compound having the structure: or a pharmaceutically acceptable salt thereof, or a pharmaceutically acceptable solvate of said compound or pharmaceutically acceptable salt, wherein A, A? and A? are independently O, C?O, C?R? or N?R?, where R? and R? may independently be H, amino, ?NR7COR6, COR6, ?CONR7R8, C1-C6 alkyl, or hydroxy(C1-C6 alkyl), and R? may be present or absent, and is present where the rules of valency permit, and where not more than one of A, A? and A? is O or C?O; R0 and R are independently H, Br, Cl, F, or C1-C6 alkyl; R1 is H, C1-C6 alkyl, or hydroxy(C1-C6 alkyl); R2 is selected from the group consisting of H, C1-C6 alkyl, C1-C6 alkoxy, hydroxy(C1-C6 alkyl), phenyl(C1-C6 alkyl), formyl, heteroaryl, heterocyclic, ?COR6, ?OCOR6, ?COOR6, ?NR7COR6, ?CONR7R8, and ?(CH2)n?W, where W is cyano, hydroxy, C3-C8 cycloalkyl, ?SO2NR7R8, and ?SO2?R9, where R9 is C1-C6 alkyl, C3-C8 cycloalkyl, heteroaryl, or heterocyclic; wherein each of said alkyl, cycloalkyl, heterocyclic, or heteroaryl may be unsubstituted or substituted by halo, cyano, hydroxy, or C1-C6 alkyl; X is C?R3 or N, where R3 may be H or C1-C6 alkyl; R4 and R5 are independently H, amino, C1-C6 alkyl, or hydroxy(C1-C6 alkyl); R6, R7 and R8 are each independently H, C1-C6 alkyl, C1-C4 alkoxy(C1-C6 alkyl), or C3-C8 cycloalkyl, said C1-C6 alkyl is optionally substituted by halo, CN or hydroxy; or, R7 and R8 together with the atom bonded thereto form a 5- or 6-membered ring, said ring being optionally substituted by halo, hydroxy, CN, or C1-C6 alkyl; and, n is 0, 1, 2 or 3. Also provided are methods of treatment as Janus Kinase inhibitors and pharmaceutical compositions containing the compounds of the invention and combinations thereof with other therapeutic agents.

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The present invention relates to novel derivatives of 2”-deoxyuridine substituted in the 5-, 3”- or 5”-position by alpha-aminoacyl groups, to a process for their preparation and the drugs in which they are present.These derivatives have the following general formula: STR1 in which R is selected from an alkyl or alkenyl radical having from 1 to 4 carbon atoms, an aryl radical or a halogen, it being possible for said alkyl, alkenyl and aryl radicals to contain at least one halogen substituent, and a radical of the formula –NH–R 1, in which R 1 is an amino acid residue or a peptide residue containing from 2 to 6 amino acids; andR” and R”” are selected from a hydroxyl radical and a radical of the formula –NH–R 1, in which R 1 is as defined above,with the proviso that R” and R”” are not simultaneously –NH–R 1 and that, when R is –NH–R 1, R” and R”” are simultaneously a hydroxyl group.Application: treatment of cancers and viral infections.

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Macrocyclic receptor 1 has been synthesised, as a racemate and as a single enantiomer, utilising a Stille coupling for the formation of the biphenyl portion and a macrolactamisation as the final step. The binding properties for the racemic and the homochiral macrocycle with amino acid and dipeptide derivatives, in CDCl3 solution, have been investigated. In the case of racemic 1, addition of homochiral peptide substrates led to two distinct diastereomeric complexes, and the well separated signals for several protons in the 1H NMR spectrum could be conveniently followed in titration experiments, allowing determination of both binding constants for the two diastereoisomeric complexes, and indicating that 1 is capable of enantioselective recognition. Titration of homochiral 1 with the same peptide substrates allowed the sense of the enantioselectivity to be determined, and experiments with a greater range of substrates indicated that 1 is particularly effective for the recognition of N-Cbz-beta-alanyl-L-amino acids, the strongest binding being observed with N-Cbz-beta-alanyl-L-alanine (- DeltaG(ass)= 19.9 kJ mol-1). Notably the binding of N-Cbz-beta-alanyl-L-lactic acid was considerably weaker (-DeltaG(ass)= 13.1 kJ mol-1), presumably due to replacement of an NH hydrogen-bond donor in the case of N-Cbz-beta-alanyl-L- alanine with an oxygen lone-pair in the case of N-Cbz-beta-alanyl-L-lactic acid. Molecular modelling and 2D NMR studies on the free macrocycle 1 and associated complexes did not provide conclusive evidence for the structure of the host-guest complexes, but did serve to emphasise the flexibility of 1, which despite this flexibility, shows strong, selective binding of certain peptide guests.

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Strains of the bacteria Erwinia herbicola produce antibiotics that effectively control E. amylovora, the bacterial pathogen responsible for the plant disease fire blight. Pantocin B was the first of these antibiotics to be characterized, and a flexible synthesis of various analogues is reported. Embedded in the “pseudotripeptide” backbone of pantocin B are a methylenediamine and a methyl sulfone, both unusual structural features in natural products. The peptidic nature of pantocin B facilitated a series of structure-activity relationship studies that probed the roles of these functional groups in determining the biological activity of pantocin B. A clear demarcation of the roles between the N- and C-terminal portions of the antibiotic was determined as a result of the structure-activity relationship studies. The N-terminal L-alanyl group is needed for cellular import but not for interaction with the intracellular target, the arginine biosynthetic enzyme N-acetylomithine aminotransferase. The methylenediamine and methyl sulfone portions were found to be essential for antibiotic activity, presumably due to extensive interactions with N-acetylornithine aminotransferase.

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4-Hydroxy-2-methylproline diastereomers are successfully prepared without the use of an external chiral auxiliary. Dihydroxylation of the key intermediate 2 resulted in lactone 4 as a mixture of diastereomers in good yield. Mesylation, hydrogenation and concomitant intramolecular cyclization of 4 led to the formation of both (2R,4R)- and (2R,4S)-4-hydroxy-2-methylprolines as a mixture of diastereomers. Appropriate protection followed by chromatographic separation resulted in isolation of both cis- and trans-diastereomers in enantiomerically pure form and in equal quantity. In subsequent experiments, the synthesis of the more challenging diastereomers (2R,4R)- and (2S,4S)-4-hydroxy-2-methylproline was achieved by diastereoselective iodolactonization of (R)- or (S)-allylalanine obtained after hydrolysis of intermediate 2, followed by pyrrolidine ring closer under mild alkaline conditions. After selective protection and deprotection, Fmoc-(2R,4R)-alpha-Me-Hyp(tBu)-OH 14, a building block suitable for solid phase peptide synthesis was obtained.

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Prolyl oligopeptidases cleave peptides on the carboxy side of internal proline residues and their inhibition has potential in the treatment of human brain disorders. Using our docking program FITTED, we have designed a series of constrained covalent inhibitors, built from a series of bicyclic scaffolds, to study the optimal shape required for these small molecules. These structures bear nitrile functional groups that we predicted to covalently bind to the catalytic serine of the enzyme. Synthesis and biological assays using human brain-derived astrocytic cells and endothelial cells and human fibroblasts revealed that these compounds act as selective inhibitors of prolyl oligopeptidase activity compared to prolyl-dipeptidyl-aminopeptidase activity, are able to penetrate the cells and inhibit intracellular activities in intact living cells. This integrated computational and experimental study shed light on the binding mode of inhibitors in the enzyme active site and will guide the design of future drug-like molecules.

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The synthesis of 10 G*PE analogues, wherein the glycine residue has been modified, is described by coupling readily accessible dibenzyl-l-prolyl-l- glutamate 2 with various analogues of glycine. Pharmacological evaluation of the novel compounds was undertaken to further understand the role of the glycine residue on the observed neuroprotective properties of the endogenous tripeptide GPE.

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